DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and ARFA1E

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_191788.1 Gene:ARFA1E / 825402 AraportID:AT3G62290 Length:181 Species:Arabidopsis thaliana


Alignment Length:180 Identity:81/180 - (45%)
Similarity:115/180 - (63%) Gaps:3/180 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFLTVLKKMRQKEREMRILLLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHNGYTLNM 64
            :.|..:..|:..| :|||||::|||.|||||||.:.. ||.:.|| ||:|||::|:|:...:..:
plant     3 LSFGKLFSKLFAK-KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTV 65

  Fly    65 WDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDL 129
            ||||||..:|..||:||::|.||::||||.||.|:.....||..:|.|:.|..|.|||..|||||
plant    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDL 130

  Fly   130 PGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLIADIAKR 179
            |.|:::.||.:.|.|..:...||.:....|.:||.|...:|||..:||.:
plant   131 PNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 79/172 (46%)
ARFA1ENP_191788.1 PLN00223 1..181 CDD:165788 81/180 (45%)

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