DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arl13a

DIOPT Version :9

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_005173366.1 Gene:arl13a / 793658 ZFINID:ZDB-GENE-040426-1790 Length:434 Species:Danio rerio


Alignment Length:190 Identity:61/190 - (32%)
Similarity:97/190 - (51%) Gaps:16/190 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LKKMRQKEREMRILLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQK 71
            :.|::|..|::.:|::|||.||||:.::.....|...:.||.|.....|....|.:|:.|:||..
Zfish    37 VSKLQQPLRKITVLVVGLDKAGKTSCVRGMLRVPPGDVGPTHGCVRTELRLENYLVNILDIGGGL 101

  Fly    72 SLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSN 136
            .:|..||.::....|:::||||:||.|::...:.|..||:..|:||..||||.||||...||..|
Zfish   102 EVRGSWREHYGEAHGIIFVVDSSDRQRMKEVKETLVDLLKHPRVAGKPLLVLANKQDKMNALLGN 166

  Fly   137 EIKEILHLEDITTHHWLVAGVSAVTG---------EKLLSSMDWLI-------ADIAKRI 180
            |:.|||.||.:......:..:...:.         .|.|..:.||:       .|:..|:
Zfish   167 ELIEILSLERLVNQSRSLCHIEPCSASMDLRRWSDRKTLRGLRWLLRAVCLDYPDLCARV 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 59/183 (32%)
arl13aXP_005173366.1 Arl2l1_Arl13_like 48..214 CDD:133361 56/165 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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