DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and Arf6

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_077066.1 Gene:Arf6 / 79121 RGDID:621279 Length:175 Species:Rattus norvegicus


Alignment Length:162 Identity:71/162 - (43%)
Similarity:104/162 - (64%) Gaps:2/162 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 REMRILLLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYWR 78
            :|||||:||||.|||||||.:.. |:.:.|| ||:|||::|:.:.....|:||||||..:|..||
  Rat    12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWR 75

  Fly    79 NYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILH 143
            :|:..|.||::|||.|||.|::...|||..::.:..:..|.:|:..||||||.|:..:||:|.|.
  Rat    76 HYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLG 140

  Fly   144 LEDITTHHWLVAGVSAVTGEKLLSSMDWLIAD 175
            |..|...:|.|....|.:|:.|...:.||.::
  Rat   141 LTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 71/160 (44%)
Arf6NP_077066.1 ARF 1..175 CDD:128474 71/162 (44%)

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