DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and Arl2

DIOPT Version :9

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_006230961.1 Gene:Arl2 / 65142 RGDID:69326 Length:210 Species:Rattus norvegicus


Alignment Length:210 Identity:136/210 - (64%)
Similarity:158/210 - (75%) Gaps:26/210 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFLTVLKKMRQKEREMRILLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNGYTLNMW 65
            ||.||:||||:|||||:|:|:|||||||||||||:||||.:||||||||||||||||.|:.||:|
  Rat     1 MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIW 65

  Fly    66 DVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQE------------------ 112
            ||||||||||||||||||||||:||||||||.|::.|.:|||.||.|                  
  Rat    66 DVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEEVCPVLTGSQATACHKCH 130

  Fly   113 --------ERLAGATLLVLCNKQDLPGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSM 169
                    |||||||||:..||||||||||.|.|:|.|.|:.|.:|||.:.|.||||||.||..:
  Rat   131 GLLGHSGRERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGI 195

  Fly   170 DWLIADIAKRIFTLD 184
            |||:.||:.|:||.|
  Rat   196 DWLLDDISSRVFTAD 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 128/197 (65%)
Arl2XP_006230961.1 Arl2 3..201 CDD:206720 134/208 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352174
Domainoid 1 1.000 274 1.000 Domainoid score I1709
eggNOG 1 0.900 - - E1_KOG0073
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1260
Inparanoid 1 1.050 289 1.000 Inparanoid score I2728
OMA 1 1.010 - - QHG53567
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 1 1.000 - - FOG0005745
OrthoInspector 1 1.000 - - oto96433
orthoMCL 1 0.900 - - OOG6_103223
Panther 1 1.100 - - LDO PTHR45697
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4140
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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