DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl2 and sar1ab

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001017882.1 Gene:sar1ab / 550581 ZFINID:ZDB-GENE-050417-437 Length:198 Species:Danio rerio


Alignment Length:179 Identity:60/179 - (33%)
Similarity:95/179 - (53%) Gaps:7/179 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GFLTVLKKMRQKEREMRILLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNGYTLNMWD 66
            ||..||:.:...::..:::.||||||||||:|.....:.:....|||....:.|...|.|...:|
Zfish    11 GFSNVLQLLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELSIAGMTFTTFD 75

  Fly    67 VGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPG 131
            :||....|..||||..:.:|:|::||.||..||:....||..||.:|.::...:|:|.||.|.|.
Zfish    76 LGGHAQARRVWRNYLPAINGIVYLVDCADHERLQEAKIELDALLTDETISNVPILILGNKIDRPK 140

  Fly   132 ALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKL-LSSMDWLIADIAKR 179
            |:|.:.::.:..|...||      |...|:.::| |..|:..:..:.||
Zfish   141 AISEDALRGMFGLYGHTT------GKGNVSLKELNLRPMEVFMCSVLKR 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 57/172 (33%)
sar1abNP_001017882.1 Sar1 3..197 CDD:206645 60/179 (34%)

Return to query results.
Submit another query.