DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arl4ca

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001017749.1 Gene:arl4ca / 550444 ZFINID:ZDB-GENE-050417-265 Length:192 Species:Danio rerio


Alignment Length:175 Identity:74/175 - (42%)
Similarity:107/175 - (61%) Gaps:14/175 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 REMRILLLGLDNAGKTTILKR--FNGEPIDTISPTLGFNIKTLE-----HNGYTLNMWDVGGQKS 72
            :.:.|::||||:|||||:|.|  || |.::|: ||:|||.:.::     ..|.:.:.||||||:.
Zfish    12 QSLHIVMLGLDSAGKTTVLYRLKFN-EFVNTV-PTIGFNTEKIKLSNGTAKGISCHFWDVGGQEK 74

  Fly    73 LRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNE 137
            ||..|::|...|||:::||||.|..|||....||..:.:.....|..|||:.||||||.:|:.:|
Zfish    75 LRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSLTVSE 139

  Fly   138 IKEILHLEDI---TTHHWLVAGVSAVTGEKLLSSMDWLIADIAKR 179
            |::.|.|.::   ||:|  |....|:.||.|...||.|...|.||
Zfish   140 IEKHLALHELSPSTTYH--VQPACAIIGEGLHEGMDKLYEMIVKR 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 71/169 (42%)
arl4caNP_001017749.1 Arl4_Arl7 11..192 CDD:206719 74/175 (42%)

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