DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arfrp1

DIOPT Version :9

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_005166227.1 Gene:arfrp1 / 503602 ZFINID:ZDB-GENE-050227-14 Length:201 Species:Danio rerio


Alignment Length:183 Identity:65/183 - (35%)
Similarity:98/183 - (53%) Gaps:11/183 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KKMRQKEREMRILLLGLDNAGKTTIL--------KRFNGEPIDTISPTLGFNIKTLEHNGYTLNM 64
            |.|.||: |..||:||||||||||.|        |.:.|..:..|:.|:|.||.|::.....|..
Zfish    10 KYMFQKD-EYCILILGLDNAGKTTFLEQTKTRFSKNYKGMNLSKITTTVGLNIGTIDVGKARLMF 73

  Fly    65 WDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDL 129
            ||:|||:.|:|.|..|:..:.|:::|:||.|..||.......:.::..|.|.|..||||.||||:
Zfish    74 WDLGGQEELQSLWDKYYAESHGVIYVIDSTDEERLGESKNAFEKMISSEALEGVPLLVLANKQDV 138

  Fly   130 PGALSSNEIKEILH--LEDITTHHWLVAGVSAVTGEKLLSSMDWLIADIAKRI 180
            ...||..:||....  ...|.....||...:|::|:.:...::|::..:.:.|
Zfish   139 ENCLSVPDIKTAFSDCAPKIGKRDCLVQPCAALSGQGVNDGIEWMVKCVIRNI 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 64/176 (36%)
arfrp1XP_005166227.1 Arfrp1 19..186 CDD:206725 59/166 (36%)
Ras 20..189 CDD:278499 59/168 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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