DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arl6

DIOPT Version :9

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_021329928.1 Gene:arl6 / 494134 ZFINID:ZDB-GENE-041219-2 Length:194 Species:Danio rerio


Alignment Length:173 Identity:64/173 - (36%)
Similarity:101/173 - (58%) Gaps:12/173 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KEREMRILLLGLDNAGKTTI---LKRFNGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLR 74
            |::|:.:|.|||||:|||||   ||..|.:..| |.||:||:|:..:.:..:..::|:.||...|
Zfish    14 KKKEVNVLCLGLDNSGKTTIINQLKPSNAQAQD-IVPTIGFSIEKFKTSSLSFTVFDMSGQGRYR 77

  Fly    75 SYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLL-----QEERLAGATLLVLCNKQDLPGALS 134
            :.|.:|::....:::|:||.|::|:....:||..||     :..|:   .||...||.||..|||
Zfish    78 NLWEHYYKEGQAIIFVIDSGDKLRMVVAKEELDTLLNHPDIKHRRI---PLLFFANKMDLRDALS 139

  Fly   135 SNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLIADIA 177
            :.::.::|.||:|....|.:....||.||.||..:|||...||
Zfish   140 AVKVSQLLCLENIKDKPWHICASDAVKGEGLLEGVDWLQEQIA 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 62/169 (37%)
arl6XP_021329928.1 Arl6 19..180 CDD:206722 60/164 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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