DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arf2a

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_958912.1 Gene:arf2a / 399477 ZFINID:ZDB-GENE-040122-4 Length:181 Species:Danio rerio


Alignment Length:175 Identity:79/175 - (45%)
Similarity:113/175 - (64%) Gaps:5/175 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MG--FLTVLKKMRQKEREMRILLLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHNGYTL 62
            ||  |..:.|.:..| :|||||::|||.|||||||.:.. ||.:.|| ||:|||::|:|:...:.
Zfish     1 MGNMFAGLFKNLLGK-KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISF 63

  Fly    63 NMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQ 127
            .:||||||..:|..||:||::|.||::||||.||.|:....:||..:|.|:.|..|.|||..|||
Zfish    64 TVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFANKQ 128

  Fly   128 DLPGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWL 172
            |||.|:::.||.:.|.|..:...:|.:....|.:|:.|...:|||
Zfish   129 DLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 77/171 (45%)
arf2aNP_958912.1 P-loop containing Nucleoside Triphosphate Hydrolases 5..179 CDD:476819 77/171 (45%)

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