DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arf6.2

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_012823627.1 Gene:arf6.2 / 395051 XenbaseID:XB-GENE-967358 Length:229 Species:Xenopus tropicalis


Alignment Length:175 Identity:75/175 - (42%)
Similarity:109/175 - (62%) Gaps:5/175 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TVLKKMRQK---EREMRILLLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHNGYTLNMW 65
            :::.||..|   .:|||||:||||.|||||||.:.. |:.:.|| ||:|||::|:.:.....|:|
 Frog    53 SIMGKMLSKVFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVETVTYKNVKFNVW 116

  Fly    66 DVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLP 130
            |||||..:|..||:|:..|.||::|||.|||.|::...|||..::.:..:..|.:|:..|||||.
 Frog   117 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLA 181

  Fly   131 GALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLIAD 175
            .|:..:||:|.|.|..|...:|.|....|.|||.|...:.||.::
 Frog   182 DAMKPHEIQEKLGLTRIRDRNWYVQPSCANTGEGLYEGLMWLTSN 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 75/173 (43%)
arf6.2XP_012823627.1 P-loop containing Nucleoside Triphosphate Hydrolases 55..229 CDD:476819 75/173 (43%)

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