DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arl5c

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_957140.1 Gene:arl5c / 393819 ZFINID:ZDB-GENE-040426-1866 Length:179 Species:Danio rerio


Alignment Length:160 Identity:68/160 - (42%)
Similarity:105/160 - (65%) Gaps:2/160 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EREMRILLLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYW 77
            :||.:::::|||||||||||.:| ..|.:.| |||:|.|::.:........:||:|||:|||:.|
Zfish    14 DREHKVIIVGLDNAGKTTILYQFLTKEAVQT-SPTIGSNVEEIAIKKTRFLVWDIGGQESLRATW 77

  Fly    78 RNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEIL 142
            .:|:.:|:.::.||||.||.||....:||..:|..|.|..|::|||.||||:..::::.||.:.|
Zfish    78 NSYYTNTEIIILVVDSTDRERLTVTKEELHRMLAHEDLQNASVLVLANKQDMEDSMTAAEISQSL 142

  Fly   143 HLEDITTHHWLVAGVSAVTGEKLLSSMDWL 172
            .|..:|...|.|....|:|||.|.:|:||:
Zfish   143 TLSSLTARSWHVQACCALTGEGLPASLDWM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 68/160 (43%)
arl5cNP_957140.1 Arl5_Arl8 3..175 CDD:133353 68/160 (43%)

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