DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and Arl6

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster


Alignment Length:180 Identity:61/180 - (33%)
Similarity:102/180 - (56%) Gaps:7/180 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFLTVLKKM-RQKEREMRILLLGLDNAGKTTILKRF--NGEPIDTISPTLGFNIKT--LEHNGY 60
            ||.|..|..: :.|:.:|.||:|||:|:||::|:..|  :.|....:.||:||.::.  :..:|.
  Fly     1 MGMLHNLADLIKIKKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGV 65

  Fly    61 TLNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLC- 124
            ::...|:.|....|:.|.:.|::..|:::|:||:||||......||.::||...|....:.:|. 
  Fly    66 SIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFY 130

  Fly   125 -NKQDLPGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLI 173
             ||.|:..:|||.:|...|.||:|....|.:...||::||.|...:.|||
  Fly   131 GNKMDMEDSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLI 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 59/178 (33%)
Arl6NP_611421.1 Arl6 19..182 CDD:206722 55/162 (34%)

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