DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl2 and Arf6

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster


Alignment Length:162 Identity:70/162 - (43%)
Similarity:103/162 - (63%) Gaps:2/162 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 REMRILLLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYWR 78
            :|||||:||||.|||||||.:.. |:.:.|| ||:|||::|:.:.....|:||||||..:|..||
  Fly    12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWR 75

  Fly    79 NYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILH 143
            :|:..|.||::|||.|||.|::....||..::.:..:..|.:|:..||||||.|:..:||:|.|.
  Fly    76 HYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLG 140

  Fly   144 LEDITTHHWLVAGVSAVTGEKLLSSMDWLIAD 175
            |..|...:|.|....|.:|:.|...:.||.::
  Fly   141 LTRIRDRNWYVQPSCATSGDGLSEGLIWLTSN 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 70/160 (44%)
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 70/162 (43%)

Return to query results.
Submit another query.