DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and Arfrp1

DIOPT Version :9

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster


Alignment Length:181 Identity:67/181 - (37%)
Similarity:101/181 - (55%) Gaps:11/181 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KKMRQKEREMRILLLGLDNAGKTTIL--------KRFNGEPIDTISPTLGFNIKTLEHNGYTLNM 64
            |.|.||: :..:::||||||||||.|        :.:.|.....|:.|:|.||.|::..|..||.
  Fly    10 KYMTQKD-DYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNF 73

  Fly    65 WDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDL 129
            ||:|||:.|:|.|..|::.:.|:::|:||.||.|:|........:::.|.|:|..||:|.|||||
  Fly    74 WDLGGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDL 138

  Fly   130 PGALSSNEIKEILHLED--ITTHHWLVAGVSAVTGEKLLSSMDWLIADIAK 178
            |..:...|||.:.....  |.....|...|||:.||.:...:.||:..|.:
  Fly   139 PDVMGVREIKPVFQQAGALIGRRDCLTIPVSALHGEGVDEGIKWLVEAIKR 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 66/176 (38%)
Arfrp1NP_572526.1 small_GTP 17..181 CDD:272973 60/163 (37%)
Arfrp1 19..186 CDD:206725 62/166 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455848
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.850

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