DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and Arl9

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_017454588.1 Gene:Arl9 / 289565 RGDID:1303337 Length:780 Species:Rattus norvegicus


Alignment Length:161 Identity:54/161 - (33%)
Similarity:78/161 - (48%) Gaps:6/161 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KEREMRILLLGLDNAGKTTILKRFNGEPI-DTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSY 76
            |.:..:||:||||.||||::|.......: .:.:||||||...:......:...::||.:..|||
  Rat   608 KVKNKQILVLGLDGAGKTSVLHFLASNTVRHSTAPTLGFNAVNISSEDRQMEFLEIGGSEPFRSY 672

  Fly    77 WRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQ-DLPGALSSNEIKE 140
            |..|......|::||||||..||....:.|..|:...  ....|:|..||| ||..|....:|.:
  Rat   673 WDMYLPKGWLLIFVVDSADHKRLPEAKKYLHQLIDPN--PDLPLVVFANKQKDLEAAYRITDIHD 735

  Fly   141 ILHLEDITTHHWLVAGVSAVT--GEKLLSSM 169
            .|.|.|:.....|....:.||  |.::.|.|
  Rat   736 ALALSDVGNDRKLFLFGTQVTRNGSEIPSIM 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 54/161 (34%)
Arl9XP_017454588.1 PTZ00121 <106..519 CDD:173412
P-loop containing Nucleoside Triphosphate Hydrolases 613..778 CDD:476819 53/156 (34%)
Blue background indicates that the domain is not in the aligned region.

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