DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and Arl5c

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_997114.1 Gene:Arl5c / 217151 MGIID:3028577 Length:179 Species:Mus musculus


Alignment Length:176 Identity:69/176 - (39%)
Similarity:108/176 - (61%) Gaps:4/176 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFLTVLKKMR-QKEREMRILLLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHNGYTLN 63
            ||.| :.|.|| ...:|.:::::|||||||||||.:| ..|.:.|.| |:|.|::.:........
Mouse     1 MGQL-IAKLMRIFGSQEHKVIIVGLDNAGKTTILYQFLTNEVVHTCS-TIGSNVEEIVLRKTHFL 63

  Fly    64 MWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQD 128
            |||:|||::|||.|..|:.:.:.::.|:||.||.||.:..:||..:|..|.|..|::|:..||||
Mouse    64 MWDLGGQEALRSTWDTYYSNAEFVILVIDSTDRNRLLTTREELYKMLAHEALQNASVLIFANKQD 128

  Fly   129 LPGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLIA 174
            :..::::.||.:.|.|..|..|.|.:.|..|:|||.|.:.:.|:.|
Mouse   129 VKDSMTTAEISQFLTLSAIKDHPWHIQGCCALTGEGLPAGLQWMQA 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 67/174 (39%)
Arl5cNP_997114.1 Arl5_Arl8 3..172 CDD:133353 65/170 (38%)

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