DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and ARL13B

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_878899.1 Gene:ARL13B / 200894 HGNCID:25419 Length:428 Species:Homo sapiens


Alignment Length:180 Identity:60/180 - (33%)
Similarity:105/180 - (58%) Gaps:9/180 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KKMRQKEREMRILLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKS 72
            |:.|:..|::.:|::||||||||...|...||..:.::||:||:...|....:.:.::|:||...
Human    13 KRWREPVRKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIR 77

  Fly    73 LRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNE 137
            :|..|:||:..:.|:::||||:|..|:|...:.:..:|:..|::|..:|||.||||..|||...:
Human    78 IRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALGEAD 142

  Fly   138 IKEILHLEDITTHHWLVAGV---SAVTG------EKLLSSMDWLIADIAK 178
            :.|.|.||.:...|..:..:   ||::|      :.:...:.||:..||:
Human   143 VIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLLHVIAR 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 58/175 (33%)
ARL13BNP_878899.1 Arl2l1_Arl13_like 23..189 CDD:133361 55/165 (33%)
CCDC47 <199..241 CDD:480722
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..287
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..428
Blue background indicates that the domain is not in the aligned region.

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