DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arf-6

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_503011.1 Gene:arf-6 / 191608 WormBaseID:WBGene00000184 Length:175 Species:Caenorhabditis elegans


Alignment Length:160 Identity:67/160 - (41%)
Similarity:101/160 - (63%) Gaps:2/160 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EREMRILLLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYW 77
            ::|:|||:||||.|||||||.:.. |:.:.|| ||:|||::|:.:.....|:||||||..:|..|
 Worm    11 KKELRILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVETVTYKNIKFNVWDVGGQDKIRPLW 74

  Fly    78 RNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEIL 142
            |:|:..|..|::|:|:|||.|::....||..::.:..:..|.:||..|||||..|:..:||::.|
 Worm    75 RHYYTGTQALIFVMDAADRDRVDEARMELHRIINDREMKEAIILVFANKQDLADAMKPHEIQDKL 139

  Fly   143 HLEDITTHHWLVAGVSAVTGEKLLSSMDWL 172
            .|..|...:|.|....|.||:.|...:.||
 Worm   140 GLTRIRDRNWYVQPSCASTGDGLHEGLTWL 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 67/160 (42%)
arf-6NP_503011.1 Arf6 5..172 CDD:206716 67/160 (42%)

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