DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and sar-1

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_500582.1 Gene:sar-1 / 177217 WormBaseID:WBGene00022678 Length:193 Species:Caenorhabditis elegans


Alignment Length:178 Identity:57/178 - (32%)
Similarity:99/178 - (55%) Gaps:7/178 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLTVLKKMRQKEREMRILLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNGYTLNMWDV 67
            |..||..:....::.:::.||||||||||:|.....:.|....|||....:.:...|.:...:|:
 Worm     8 FNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDL 72

  Fly    68 GGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGA 132
            ||....|..|::||.:.|.:|:::|.||..|::....||:.|||:|::|...:|:|.||.|.|||
 Worm    73 GGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGA 137

  Fly   133 LSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLS-SMDWLIADIAKR 179
            ||.:::|..|:::.:.|      |...|:..::.| .|:..:..:.:|
 Worm   138 LSEDQLKWQLNIQHMCT------GKGDVSRNEMASRPMEVFMCSVLQR 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 56/172 (33%)
sar-1NP_500582.1 Sar1 3..193 CDD:206645 57/178 (32%)

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