DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arl-5

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001379051.1 Gene:arl-5 / 176392 WormBaseID:WBGene00000189 Length:178 Species:Caenorhabditis elegans


Alignment Length:177 Identity:67/177 - (37%)
Similarity:108/177 - (61%) Gaps:8/177 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFLTVLKKMRQK---EREMRILLLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHNGYT 61
            ||.  ::.|:.|.   .::.:|:::|||||||||||..: ..:.::| .||:|.|::.:.:....
 Worm     1 MGL--IMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVET-KPTIGSNVEEVSYRNLD 62

  Fly    62 LNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNK 126
            ..:||:|||:|||..|..|:..||.::.|:||:|..|:....::|..:||.|.||.|.:|||.||
 Worm    63 FVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANK 127

  Fly   127 QDLPGALSSNEIKEILHLEDIT-THHWLVAGVSAVTGEKLLSSMDWL 172
            ||||||::..|:...|.|:.:. ...|.:.|..||.||.|..:::|:
 Worm   128 QDLPGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWI 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 65/175 (37%)
arl-5NP_001379051.1 Arl5_Arl8 3..177 CDD:133353 65/175 (37%)

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