DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arl-1

DIOPT Version :9

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_495816.1 Gene:arl-1 / 174375 WormBaseID:WBGene00000187 Length:180 Species:Caenorhabditis elegans


Alignment Length:166 Identity:79/166 - (47%)
Similarity:108/166 - (65%) Gaps:2/166 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 REMRILLLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYWR 78
            ||||||:||||.|||||||.|.. ||.:.|| ||:|||::.:|:......:||:|||.|:|.|||
 Worm    15 REMRILILGLDGAGKTTILYRLQVGEVVTTI-PTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWR 78

  Fly    79 NYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILH 143
            .|:.:||.:::|||||||.|:....|||..:|||:.|.||.|.||.||||:.|.|:..|:.:.|.
 Worm    79 CYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCLTETEVYKALG 143

  Fly   144 LEDITTHHWLVAGVSAVTGEKLLSSMDWLIADIAKR 179
            |:.:......:...||..||.|..:||||...:.::
 Worm   144 LDALRNRTIQIFKTSASKGEGLDPAMDWLANQLQQK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 79/160 (49%)
arl-1NP_495816.1 SAR 7..173 CDD:197556 78/158 (49%)
Arl1 18..175 CDD:206718 76/157 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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