DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arl3

DIOPT Version :9

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_002938771.2 Gene:arl3 / 100492073 XenbaseID:XB-GENE-956688 Length:182 Species:Xenopus tropicalis


Alignment Length:181 Identity:92/181 - (50%)
Similarity:130/181 - (71%) Gaps:2/181 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFLTVLKKMRQ-KEREMRILLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNGYTLNM 64
            ||.|::|:|::. .::|:||||||||||||||:||:...|.|..|:||.|||||:::..|:.||:
 Frog     1 MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNV 65

  Fly    65 WDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDL 129
            ||:|||:.:|.|||||||:||.|::|:|||||.|.|..||||..||.||:|:|..:|:..|||||
 Frog    66 WDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDL 130

  Fly   130 PGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLIADI-AKR 179
            ..|..::||.|.|:|..|....|.:...||:|||.:...|:|:..:: ||:
 Frog   131 LTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 88/172 (51%)
arl3XP_002938771.2 Arl3 3..176 CDD:206721 88/172 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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