DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and arl5a

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_002936704.1 Gene:arl5a / 100490823 XenbaseID:XB-GENE-1004384 Length:179 Species:Xenopus tropicalis


Alignment Length:165 Identity:65/165 - (39%)
Similarity:101/165 - (61%) Gaps:0/165 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 REMRILLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYWRN 79
            :|.:::::|||||||||||.:|:...:...|||:|.|::.:..|.....|||:|||:||||.|..
 Frog    15 QEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNT 79

  Fly    80 YFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILHL 144
            |:.:|:.::.||||.||.|:....:||..:|..|.|..|.|||..||||:...::..||.:.|.|
 Frog    80 YYTNTEFVIIVVDSTDRERIAVTREELYKMLSHEDLKKAGLLVFANKQDVKECMTVAEISQYLKL 144

  Fly   145 EDITTHHWLVAGVSAVTGEKLLSSMDWLIADIAKR 179
            ..:..|.|.:....|:|||.|...::|:::.:..|
 Frog   145 TSVKDHPWHIQACCALTGEGLCQGLEWMMSRLKVR 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 64/159 (40%)
arl5aXP_002936704.1 Arl5_Arl8 3..175 CDD:133353 64/159 (40%)

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