DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxm and pax5

DIOPT Version :10

Sequence 1:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_571713.2 Gene:pax5 / 60636 ZFINID:ZDB-GENE-001030-2 Length:396 Species:Danio rerio


Alignment Length:412 Identity:145/412 - (35%)
Similarity:192/412 - (46%) Gaps:94/412 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPESQCPQ-------YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCV 58
            ||.:.:.|.       :|.|||||||||||||||:..|.||||||..|:||||||||||||||||
Zfish     1 MDLDQKGPSLRIGRSGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCV 65

  Fly    59 SKILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 123
            ||||.||:|||||.||.||||||:|.|||||:.|.:.|:::|.:||||||||||:|.:||..:||
Zfish    66 SKILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 130

  Fly   124 SVSSISRILRNKLGSLGHQHTPGTVMGSGSSSGGGSVSSNGGQNNGTSASNNINLSNLGNPGGGP 188
            |||||:||:|.|:     |..||.         .|:||:                          
Zfish   131 SVSSINRIIRTKV-----QQPPGQ---------SGAVSA-------------------------- 155

  Fly   189 HHPHHHHHHQSAAAAASAHHVHAHAHAHAHLYNSIYQPYSAAAAYSMKTPCGSPSPPQGAGG--- 250
                  |:..|..|......|.:.|...::..:.|....|.|.|...|........|...|.   
Zfish   156 ------HNLASTVAVTQVSAVTSDAAGSSYSISGILGISSPADASKRKRDDPLQDSPLANGHSHS 214

  Fly   251 ---------QGSVPHPHQLRSVAAAAAAAHWPSSHSVSDILAHHQAVALRASCQVGVGVGG---- 302
                     :|.:..|.||.:...:|.|:.......:.:.||:      :...::|..|.|    
Zfish   215 GRDFLRKQMRGELFTPQQLETSDYSAMASLAGGLEEMKNSLAN------QTGAELGSTVAGPQSY 273

  Fly   303 --MGGMGSTVSPLPMTPSPVAGTAGGQ---PLLD--CEGGAGQQSPYNYYMY--------FQNGG 352
              :.|.....:.||..|..|..|..|.   |.|.  ..||....|||::..|        |.|..
Zfish   274 PLVSGRDLASTTLPGYPPHVPPTGQGSYSTPSLTGMVPGGDFSGSPYSHPQYSTYNESWRFANPS 338

  Fly   353 -MHHHHHHGGMMA---AGATGL 370
             :.....:|.::.   |.::||
Zfish   339 LLVFQQEYGSLLGSERAASSGL 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxmNP_001036687.1 PAX 10..133 CDD:128645 90/122 (74%)
pax5NP_571713.2 None

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