DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Poxm and PAX3

DIOPT Version :10

Sequence 1:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_852124.1 Gene:PAX3 / 5077 HGNCID:8617 Length:505 Species:Homo sapiens


Alignment Length:417 Identity:142/417 - (34%)
Similarity:179/417 - (42%) Gaps:107/417 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHETGSILPGA 75
            |.||||||||:|||||||..|.:|||:|..|||||.||||||||||||||||.||.|||||.|||
Human    36 GRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGA 100

  Fly    76 IGGSKPR-VTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRNKLGSL 139
            ||||||: ||||.|...|.|.|:.:||:|:|||||:||.:.:||:..||||||||||||:|.|. 
Human   101 IGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGK- 164

  Fly   140 GHQ------------------HTPGTVMGSGSSS----GGGSVSSNGG------QNNGTSASNNI 176
            |.:                  |:...::...:|:    .|..:.|...      |....:.....
Human   165 GEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAE 229

  Fly   177 NLSNLGNPGGGPHHPHHHHHHQSAAAA---------------------ASAHHVHAHAH------ 214
            .|..|.......|:|..:...:.|..|                     |.|:.:.|..|      
Human   230 QLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGF 294

  Fly   215 --------AHAHLYNSIYQPYSAAAAYSMKTPCGS---PSP-PQGAGGQGSVPHPHQLRSVAAAA 267
                    ....|..:.|||.|...|.|  .|..:   |.| |.....|.::|......|.....
Human   295 PPTAMPTLPTYQLSETSYQPTSIPQAVS--DPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLP 357

  Fly   268 AAAHWPSSHSVSDILAHHQAVALRASCQVGVGVGGMGGMGSTVSPL-PMTP-SPVAGTAGGQP-- 328
            :..|..||::                             .|.|.|. |..| :|..|. |..|  
Human   358 STRHGFSSYT-----------------------------DSFVPPSGPSNPMNPTIGN-GLSPQV 392

  Fly   329 --LLDCEGGAGQQSPYNYYMYFQNGGM 353
              ||...||...|...:|.:....||:
Human   393 MGLLTNHGGVPHQPQTDYALSPLTGGL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxmNP_001036687.1 PAX 10..133 CDD:128645 88/122 (72%)
PAX3NP_852124.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645 88/122 (72%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93 43/55 (78%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161 28/47 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 6/62 (10%)
Homeodomain 220..276 CDD:459649 6/55 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351 12/43 (28%)
Pax7 347..391 CDD:403540 12/73 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.