Protein Alignment Poxm and Pax7

DIOPT Version :10

• Sequence 1: NP_001036687.1
• Gene: Poxm / 40990
• FlyBaseID: FBgn0003129
• Length: 370
• Species: Drosophila melanogaster
• Sequence 2: XP_006239325.1
• Gene: Pax7 / 500574
• RGDID: 1564360
• Length: 505
• Species: Rattus norvegicus
• Alignment Length: 382
• Identity: 141/382 - (36%)
• Similarity: 178/382 - (46%)
• Gaps: 78/382 - (20%)

  Fly    11 GEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHETGSILPGA 75
            |.||||||||:|||||||..|.:|||:|..|||||.||||||||||||||||.||.|||||.|||
  Rat    36 GRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGA 100

  Fly    76 IGGSKPR-VTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPS--VSSISRILRNKLG 137
            ||||||| |.||.|...|.|.|:.:||:|:||||||||.:|.||::.|||  ||||||:||.|.|
  Rat   101 IGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFG 165

  Fly   138 SL------------GHQHTPGTVMGSGSSSG-----GGSVSSNGG------QNNGTSASNNINLS 179
            ..            |.:....::.|.....|     |..|.|...      |....:......|.
  Rat   166 KKEDDEEGDKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLE 230

  Fly   180 NLGNPGGGPHHPHHHHHHQSAAAAASAHHVHAHAHAHAHLYN--SIYQPYSAA---AAYSMKTPC 239
            .|.......|:|..:...:.|.....     ..|.......|  :.::..:.|   ||::...|.
  Rat   231 ELEKAFERTHYPDIYTREELAQRTKL-----TEARVQVWFSNRRARWRKQAGANQLAAFNHLLPG 290

  Fly   240 GSPSPPQGAGGQGSVPHPHQLRSVAAAAAAAHWPSSHSVSDILAHHQAVALRASCQVGVGVGGMG 304
            |.|..     |..::| |:||...|       :|:: :||               |.|
  Rat   291 GFPPT-----GMPTLP-PYQLPDSA-------YPTT-TVS---------------QDG------- 319

  Fly   305 GMGSTV-SPLPMTPSPV--AGTAGGQPLLDCEGGAGQQSPYNYYM-YFQNGGMHHHH 357
              |||| .|.|:.||.:  .|.|......|.....|.:..::.|. .|.|.|...:|
  Rat   320 --GSTVHRPQPLPPSTMHQGGLAAAAAAADSSSAYGARHSFSSYSDSFMNPGAPSNH 374

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Poxm	NP_001036687.1	PAX	10..133	CDD:128645	89/124 (72%)
Pax7	XP_006239325.1	PAX	34..161	CDD:128645	89/124 (72%)
		Homeodomain	218..274	CDD:459649	7/60 (12%)
		Pax7	<354..385	CDD:403540	5/21 (24%)