DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxm and Ptx1

DIOPT Version :10

Sequence 1:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster


Alignment Length:201 Identity:52/201 - (25%)
Similarity:77/201 - (38%) Gaps:40/201 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPESQCPQYGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARY 65
            |.|.|........:.:|.|   |.|.|..|... ..:.|....|| :|..:..|...: ::.|:.
  Fly   413 MLPGSMGSSLSNTSNVGAV---GAPCPYTTPAN-PYMYRSAAEPC-MSSSMSSSIATL-RLKAKQ 471

  Fly    66 HETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISR 130
            |        |..|.....:.|..|:     :....|:.|            |..|.| .|:.:  
  Fly   472 H--------ASAGFGSPYSAPSPVS-----RSNSAGLSA------------CQYTGV-GVTDV-- 508

  Fly   131 ILRNKLGSLGHQHTPGTVMGSGSSSGGGSVSSNGGQNNGTSASNNINL----SNLGNPGGGP-HH 190
            : .|.||:|.:||.......||.|.||..| .||.|.:..:..::.||    |:||..|||| :|
  Fly   509 VXENALGALLNQHQHHLQHFSGGSVGGSGV-PNGMQQHSGNMLHHSNLGLDHSDLGLVGGGPSNH 572

  Fly   191 PHHHHH 196
            ....:|
  Fly   573 QDEGNH 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxmNP_001036687.1 PAX 10..133 CDD:128645 23/122 (19%)
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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