DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxm and gsb

DIOPT Version :9

Sequence 1:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster


Alignment Length:404 Identity:144/404 - (35%)
Similarity:189/404 - (46%) Gaps:49/404 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHETGSILPGA 75
            |.||||||||:|||||||..|.:|||:|..|:|||.||||||||||||||||.|:.|||||.||.
  Fly    21 GRVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCVSKILNRFQETGSIRPGV 85

  Fly    76 IGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRNKLGSLG 140
            ||||||||.||.:.:.|.||||..||||:||||.:|:..|:|||.|.||||||||:||...|| |
  Fly    86 IGGSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRLLRGSSGS-G 149

  Fly   141 HQHTPGTVMGSGSSSGGG----------SVSSNGGQNNGTSASNNINLSNLGNPGGGPHHPHHHH 195
            ..|:...::|.|:.|.|.          ||.....|....:..:|..:..|........:|..:.
  Fly   150 TSHSIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYT 214

  Fly   196 HHQSA------AAAASAHHVHAHAHAHAHLYNSIYQPYSAAAAYSM---KTPCGSPSPPQGAGGQ 251
            ..:.|      .|.......:..|.....| |:...|..|..:.|.   .|...:|:|..|....
  Fly   215 REELAQSTGLTEARVQVWFSNRRARLRKQL-NTQQVPSFAPTSTSFGATPTTSAAPAPNMGMSLY 278

  Fly   252 GSVPHP----HQLRSVAAAAAAAHWPSSHSVSDILAHHQAVALRASCQVGVG------VGGMGGM 306
            .|...|    ::..:....:.|:..|:|.:.....|.|..|..:|. |.|.|      ..|:|..
  Fly   279 SSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQ-QPGTGSEFMTSTYGVGSS 342

  Fly   307 GST----VSPLPMTPSPVAGTAGGQPLLDCEGGAGQQSPYNYYMYFQN-------GGMH---HHH 357
            .:|    ...:|.||:..|.....|.......|:...|.::.|.:..:       .|.|   :||
  Fly   343 NATYPSAAYSMPQTPATSAEQLRSQFASAAASGSHHPSTWDSYNFAGSFFPPASAAGNHISGYHH 407

  Fly   358 ---HHGGMMAAGAT 368
               ....||....|
  Fly   408 QVDQKSSMMTTAPT 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxmNP_001036687.1 PAX 10..133 CDD:128645 86/121 (71%)
gsbNP_523863.1 PAX 19..143 CDD:128645 86/121 (71%)
homeodomain 186..243 CDD:238039 6/56 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450881
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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