DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxm and Poxn

DIOPT Version :10

Sequence 1:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster


Alignment Length:398 Identity:141/398 - (35%)
Similarity:180/398 - (45%) Gaps:116/398 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PQYGE--VNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHETGS 70
            |..|:  |||||||||||||||:..|.|||:||..|:|||||||||.||||||||||.|::||||
  Fly     2 PHTGQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGS 66

  Fly    71 ILPGAIGGSKPR-VTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRN 134
            |.||:|||||.: |.||.||..|..||:.:.|:||||||::|..:.:||.::|||:|||:|||||
  Fly    67 IRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRN 131

  Fly   135 KLGSLGHQHTPGTVMGSGSSSGGGSVSSNGGQNNGTSASNNINLSNLGNPGGGPHHPHHHHHHQS 199
                                ||..:......|.|..:|                          :
  Fly   132 --------------------SGLWTDEMTSSQQNAAAA--------------------------A 150

  Fly   200 AAAAASAHHVHAHAHAHAHLYNSIYQPYSAAAAYSMKTPCGSPS------PP----QGAG----- 249
            |||||:||..   ....::.|.....|.....|  ..||..:||      ||    ..||     
  Fly   151 AAAAAAAHQA---GSGPSNGYGGQAPPPPVTVA--PPTPAATPSIARYAKPPALMMNSAGEMPIK 210

  Fly   250 ---------GQGSVPHPHQLR------SVAAAAAAAHW---PSSHSVSDILAHHQAVALRASCQV 296
                     |.|   |.|.|.      .::.:|...||   ||....:.  ||.||.|..:..|.
  Fly   211 PAPKMPPSMGHG---HSHGLNPNVSGLDLSYSALHKHWLWNPSLLYYTQ--AHIQAQAAASGGQF 270

  Fly   297 GVGVGG----------------MGGMGSTVSPLPM-TPSPVAGTAGGQPLLDCEGGAGQQSPYNY 344
            ....||                :||...:.|.:.: ||.     |.|..|.||:  :|:.||...
  Fly   271 LPYAGGYLPHAMAAAAASSTSALGGFTKSESSIDLSTPG-----AAGDALSDCD--SGKSSPAAL 328

  Fly   345 YMYFQNGG 352
            .:....||
  Fly   329 SLTASGGG 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxmNP_001036687.1 PAX 10..133 CDD:128645 81/125 (65%)
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 84/147 (57%)

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