DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxm and oc

DIOPT Version :9

Sequence 1:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster


Alignment Length:334 Identity:89/334 - (26%)
Similarity:126/334 - (37%) Gaps:88/334 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRNKLG----SLGHQHTPGTVMGSGSSSG 156
            |.|.|.||        :.|.:..|.|:|. |.:....:|:..    .|..|....::..|.::||
  Fly    88 KTRYPDIF--------MREEVALKINLPE-SRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASG 143

  Fly   157 GG--------SVSSNGGQNNGTSASNNINLSNLGN----------------PGGGPHHPHHHHHH 197
            ||        |.:|....||..|:|||...|:.||                .|||....::.:::
  Fly   144 GGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQGGGSSGGNNSNNN 208

  Fly   198 QSAAAAASAHHVHAHAHAHAHLYNSIYQPYSAAAAYSMKTPC-----------GSPSPPQGAGGQ 251
            .:||||::|..|.|......| ::|.....:|||:.......           .:|:.....||.
  Fly   209 SAAAAASAAAAVAAAQSIKTH-HSSFLSAAAAAASGGTNQSANNNSNNNNQGNSTPNSSSSGGGG 272

  Fly   252 GSVPHPHQLRSVAAAAAAAHWPSSHSVSDILAHHQAVAL----------RASCQVGVGVGGMGGM 306
            ||....|  .|.||||||.:..::|..|..|....|.::          ..|...|..|||.||.
  Fly   273 GSQAGGH--LSAAAAAAALNVTAAHQNSSPLLPTPATSVSPVSIVCKKEHLSGGYGSSVGGGGGG 335

  Fly   307 GSTVS-PLPMTPSPVAGTAGG----QPLLDCEGGAGQQSPYNYYMYFQ--------NGGMHHHHH 358
            |...| .|.:......|...|    |.||        :|||:     |        ..|:||||.
  Fly   336 GGASSGGLNLGVGVGVGVGVGVGVSQDLL--------RSPYD-----QLKDAGGDIGAGVHHHHS 387

  Fly   359 HGGMMAAGA 367
            ..| .|||:
  Fly   388 IYG-SAAGS 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxmNP_001036687.1 PAX 10..133 CDD:128645 10/36 (28%)
ocNP_001356934.1 Homeobox 71..123 CDD:333795 11/43 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450890
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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