Protein Alignment Poxm and oc

DIOPT Version :10

• Sequence 1: NP_001036687.1
• Gene: Poxm / 40990
• FlyBaseID: FBgn0003129
• Length: 370
• Species: Drosophila melanogaster
• Sequence 2: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Alignment Length: 334
• Identity: 89/334 - (26%)
• Similarity: 126/334 - (37%)
• Gaps: 88/334 - (26%)

  Fly    96 KQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRNKLG----SLGHQHTPGTVMGSGSSSG 156
            |.|.|.||        :.|.:..|.|:|. |.:....:|:..    .|..|....::..|.::||
  Fly    88 KTRYPDIF--------MREEVALKINLPE-SRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASG 143

  Fly   157 GG--------SVSSNGGQNNGTSASNNINLSNLGN----------------PGGGPHHPHHHHHH 197
            ||        |.:|....||..|:|||...|:.||                .|||....::.:::
  Fly   144 GGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQGGGSSGGNNSNNN 208

  Fly   198 QSAAAAASAHHVHAHAHAHAHLYNSIYQPYSAAAAYSMKTPC-----------GSPSPPQGAGGQ 251
            .:||||::|..|.|......| ::|.....:|||:.......           .:|:.....||.
  Fly   209 SAAAAASAAAAVAAAQSIKTH-HSSFLSAAAAAASGGTNQSANNNSNNNNQGNSTPNSSSSGGGG 272

  Fly   252 GSVPHPHQLRSVAAAAAAAHWPSSHSVSDILAHHQAVAL----------RASCQVGVGVGGMGGM 306
            ||....|  .|.||||||.:..::|..|..|....|.::          ..|...|..|||.||.
  Fly   273 GSQAGGH--LSAAAAAAALNVTAAHQNSSPLLPTPATSVSPVSIVCKKEHLSGGYGSSVGGGGGG 335

  Fly   307 GSTVS-PLPMTPSPVAGTAGG----QPLLDCEGGAGQQSPYNYYMYFQ--------NGGMHHHHH 358
            |...| .|.:......|...|    |.||        :|||:     |        ..|:||||.
  Fly   336 GGASSGGLNLGVGVGVGVGVGVGVSQDLL--------RSPYD-----QLKDAGGDIGAGVHHHHS 387

  Fly   359 HGGMMAAGA 367
            ..| .|||:
  Fly   388 IYG-SAAGS 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Poxm	NP_001036687.1	PAX	10..133	CDD:128645	10/36 (28%)
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	11/43 (26%)