DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxm and pax9

DIOPT Version :10

Sequence 1:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_571373.1 Gene:pax9 / 30558 ZFINID:ZDB-GENE-980526-399 Length:343 Species:Danio rerio


Alignment Length:396 Identity:163/396 - (41%)
Similarity:199/396 - (50%) Gaps:131/396 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PQYGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHETGSIL 72
            |.:|||||||||||||||||||.|:||||||:||||||||||||||||||||||||||:||||||
Zfish     3 PAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGSIL 67

  Fly    73 PGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRNKLG 137
            ||||||||||||||.||.:||..|||||||||||||||||::|:|||.|:|||||||||||||:|
Zfish    68 PGAIGGSKPRVTTPNVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLPSVSSISRILRNKIG 132

  Fly   138 SLGHQHTPGTVMGSGSSSGGGSVSSNGGQNNGTSASNNINLSNLGNPGGGPHHPHHHHHHQSAAA 202
            :|                         .|.|...:|...:     :|...|..|::         
Zfish   133 NL-------------------------SQQNQYESSKQAS-----HPQPQPTIPYN--------- 158

  Fly   203 AASAHHVHAHAHAHAHLYNSIYQPYSAAAAYSMKTPCGSPSPPQGAGGQGSVPHPHQLRSVAAAA 267
                           |||:  |....|||...:.||.|.|:.|    |..::   |::       
Zfish   159 ---------------HLYS--YPTPIAAAGTKVPTPPGMPTLP----GHMAM---HRI------- 192

  Fly   268 AAAHWPSSHSVSDILAHHQAVALRASCQVGVGVGGMGGMGSTVSPLPMTPSPVAG---------- 322
                |||||||:|||      .:|:..:            ..:|..|..||....          
Zfish   193 ----WPSSHSVTDIL------GIRSITE------------QQISDNPSFPSAKLEEWRAINRSNF 235

  Fly   323 TAGGQPLLDCEGGAGQQSPY----NYYMYFQNG-----------GMHHHH---------HHGGMM 363
            :....||::     |...|:    ..|....||           .:||:|         .:.|..
Zfish   236 SPANSPLVN-----GVDKPHLEPEAKYNQTPNGLPTVNSYVTAPSIHHYHPPTQVSPYMGYSGTT 295

  Fly   364 AAGATG 369
            :|..||
Zfish   296 SAYVTG 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxmNP_001036687.1 PAX 10..133 CDD:128645 107/122 (88%)
pax9NP_571373.1 PAX 6..131 CDD:238076 110/124 (89%)

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