DRSC/TRiP Functional Genomics Resources

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Protein Alignment Poxm and eyg-1

DIOPT Version :10

Sequence 1:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_496116.1 Gene:eyg-1 / 190204 WormBaseID:WBGene00013147 Length:314 Species:Caenorhabditis elegans


Alignment Length:180 Identity:57/180 - (31%)
Similarity:80/180 - (44%) Gaps:59/180 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SHGCVSKILARYHETGSILP----GAIG--GSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLL 112
            :|..:.|:..|..::....|    .|.|  |:||:|.||:||..|.:.|:.:|.|||||||::|:
 Worm    18 AHNTMGKMTRRTSQSDGGKPSGNSNAAGGAGTKPKVATPQVVAKIEQYKRDNPTIFAWEIREKLI 82

  Fly   113 SEGICDKTNVPSVSSISRILRNKLGS---------LGHQHT----------------------PG 146
            ||.:|  |..||||||:||||.:...         |..||.                      ||
 Worm    83 SEDVC--TTPPSVSSINRILRTRAAERAAEELQMILSAQHLARPRAQQVRLPPAFPFPFPLVWPG 145

  Fly   147 ---------TVMGSGS--------SSGGGSVSSNGGQNNGTSASNNINLS 179
                     .::.||:        .:||..|..|.||   .|..:|:|||
 Worm   146 LLPNPAQLSLLLNSGALAPPVQSGGAGGPGVFGNSGQ---ISVDSNLNLS 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PoxmNP_001036687.1 PAX 10..133 CDD:128645 37/84 (44%)
eyg-1NP_496116.1 HTH_ARSR <48..101 CDD:481197 31/54 (57%)
Homeodomain 204..260 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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