Protein Alignment Poxm and Pax1

DIOPT Version :10

• Sequence 1: NP_001036687.1
• Gene: Poxm / 40990
• FlyBaseID: FBgn0003129
• Length: 370
• Species: Drosophila melanogaster
• Sequence 2: XP_006498974.1
• Gene: Pax1 / 18503
• MGIID: 97485
• Length: 534
• Species: Mus musculus
• Alignment Length: 425
• Identity: 176/425 - (41%)
• Similarity: 201/425 - (47%)
• Gaps: 155/425 - (36%)

  Fly     3 PESQCPQYGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHE 67
            |.:....||||||||||||||||||||.|:||||||:||||||||||||||||||||||||||:|
Mouse   171 PRAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNE 235

  Fly    68 TGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRIL 132
            |||||||||||||||||||.||.:||:.||.||||||||||||||::|:|||.||||||||||||
Mouse   236 TGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRIL 300

  Fly   133 RNKLGSLGHQHTPGTVMGSGSSSGGGSVSSNGGQNNGTSASNNINLSNLGNPGGGPHHPHHHHHH 197
            |||:|||..   ||....|                              ..|...|..|
Mouse   301 RNKIGSLAQ---PGPYEAS------------------------------KQPPPQPALP------ 326

  Fly   198 QSAAAAASAHHVHAHAHAHAHLYNSIYQ-PYSAAAAYSMKTPCGS-----PSPPQGAGGQGSVPH 256
                                  ||.||| ||.     |..:|.|:     |..| |:.|..|:|
Mouse   327 ----------------------YNHIYQYPYP-----SPVSPTGTKMGTHPGVP-GSAGHVSIP- 362

  Fly   257 PHQLRSVAAAAAAAHWPSSHSVSDILA----HHQAVALRASCQVGVGVGGMGGMGSTVSP----- 312
                ||         |||:||||:||.    ..|..||            .|..|:..||
Mouse   363 ----RS---------WPSAHSVSNILGIRTFMEQTGAL------------AGSEGAAYSPKMEDW 402

  Fly   313 -------LPMTPSPVAGTAGGQPLLDCE-------------GG--------------------AG 337
                   .|.:|: |.|..  :|.|:.:             ||                    ||
Mouse   403 AGVNRAAFPTSPA-VNGLE--KPALEADIKYTQSASSLSAVGGFLPACAYPASNQHGVYSAPAAG 464

  Fly   338 QQSPYNYYMYFQNGGMHHHHH----HGGMMAAGAT 368
            ..||...:...|...:..|..    |||.:||..|
Mouse   465 YLSPGPPWPPAQAPPLTPHGAGVAVHGGELAAAMT 499

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Poxm	NP_001036687.1	PAX	10..133	CDD:128645	108/122 (89%)
Pax1	XP_006498974.1	PAX	177..304	CDD:238076	111/126 (88%)