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Protein Alignment Ctr1B and COPT1
DIOPT Version :9
Sequence 1: | NP_649790.1 |
Gene: | Ctr1B / 40989 |
FlyBaseID: | FBgn0062412 |
Length: | 174 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_200711.1 |
Gene: | COPT1 / 836020 |
AraportID: | AT5G59030 |
Length: | 170 |
Species: | Arabidopsis thaliana |
Alignment Length: | 180 |
Identity: | 39/180 - (21%) |
Similarity: | 66/180 - (36%) |
Gaps: | 60/180 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 HGSDDSTSTAKSCP---------------------MIMVFHAGHCERILWRGWVASTVTEFVLSA 46
||....:|::.|.| |.|.|..|....:|:.||..::...:.|..
plant 7 HGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCL 71
Fly 47 LAIFLVSFLYEALKFLRQQLARREARRASEQLAAEQRRKNEAPAAGGCCSEAPLAEPREQTYWQR 111
:.:|.::.|.| .||.....|.|...:|.: |||
plant 72 IFVFFLAVLTE-------WLAHSSLLRGSTGDSANR-------AAG------------------- 103
Fly 112 LFASSHIVQSLLNLLQIVISYLLMLIFMTFNYWLCLAVILGLGLGYFFFG 161
::|:.:..|:|.::||:||..|:||..:.|..:.|..:|:..||
plant 104 ------LIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFG 147
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Ctr1B | NP_649790.1 |
Ctr |
17..160 |
CDD:282057 |
32/142 (23%) |
COPT1 | NP_200711.1 |
Ctr |
45..146 |
CDD:367839 |
30/139 (22%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3386 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1389393at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
5 | 4.780 |
|
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