DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctr1B and Ctr1A

DIOPT Version :10

Sequence 1:NP_649790.1 Gene:Ctr1B / 40989 FlyBaseID:FBgn0062412 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001245552.1 Gene:Ctr1A / 31601 FlyBaseID:FBgn0062413 Length:241 Species:Drosophila melanogaster


Alignment Length:177 Identity:64/177 - (36%)
Similarity:97/177 - (54%) Gaps:7/177 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DHGSDDSTSTAKSCPMIMVFHAGHCERILWRGWVASTVTEFVLSALAIFLVSFLYEALKFLRQQL 66
            :||....|......|  |.||.|:.|.||:..|...||...:.|.:||||::.:||.||:.|:.|
  Fly    66 NHGGGSGTGMEHMMP--MAFHFGYNETILFSWWHIETVAGLIGSMIAIFLLALMYEGLKYYREYL 128

  Fly    67 ARREARRASEQLAAEQRRKNEAP--AAGGCCSEAPLAEPREQTYWQ--RLFASSHIVQSLLNLLQ 127
            ..:.......:.....:|..|||  .:....:.:|:....|..:.|  .:.:.:|::|:||::||
  Fly   129 FWKTYNLLEYRPVTGPQRNPEAPRIPSPAAAAPSPVQYVGEVVHKQPPSMLSINHLLQTLLHVLQ 193

  Fly   128 IVISYLLMLIFMTFNYWLCLAVILGLGLGYFFFGWNKK-NPDESECC 173
            :.:|:||||||||:|.||||.|:||..:|||.|.|.|. ..|.:|.|
  Fly   194 VTLSFLLMLIFMTYNVWLCLMVVLGAAVGYFLFCWKKSVIVDVTEHC 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctr1BNP_649790.1 Ctr 19..160 CDD:461194 54/144 (38%)
Ctr1ANP_001245552.1 Ctr 81..226 CDD:461194 54/144 (38%)

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