DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq2 and PPT1

DIOPT Version :9

Sequence 1:NP_649789.1 Gene:Coq2 / 40988 FlyBaseID:FBgn0037574 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001190815.1 Gene:PPT1 / 828466 AraportID:AT4G23660 Length:429 Species:Arabidopsis thaliana


Alignment Length:368 Identity:172/368 - (46%)
Similarity:228/368 - (61%) Gaps:51/368 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DWSTWDKSR-------------LQDVCSRSSSTAT---EPVKQQTPLQE-------------LVS 75
            ::..|.|.|             .:.:|..|||::.   :|.|......:             |..
plant    58 NYQVWSKGRELHQEKFFGVGWNYRLICGMSSSSSVLEGKPKKDDKEKSDGVVVKEASWIDLYLPE 122

  Fly    76 AAKPYAQLMRIDRPIGTYLLFWPCAWSIALSADAGCWPDLTMLGLFGTGALIMRGAGCTINDLWD 140
            ..:.||:|.|:|:||||:||.|||.|||||:||.|..|....:.|||.|||::||||||||||.|
plant   123 EVRGYAKLARLDKPIGTWLLAWPCMWSIALAADPGSLPSFKYMALFGCGALLLRGAGCTINDLLD 187

  Fly   141 KDIDAKVERTRLRPLASGQISQFDAIVFLSAQLSLGLLVLVQLNWQSILLGASSLGLVITYPLMK 205
            :|||.||:||:|||:|||.::.|..|.||..||.|||.:|:|||..|.:||||||.||.:|||||
plant   188 QDIDTKVDRTKLRPIASGLLTPFQGIGFLGLQLLLGLGILLQLNNYSRVLGASSLLLVFSYPLMK 252

  Fly   206 RVTYWPQLVLGMAFNWGALLGWCATQGSVNLAACLPLYLSGVCWTIVYDTIYAHQ---------- 260
            |.|:|||..||:..||||||||.|.:||:..:..|||||||||||:|||||||||          
plant   253 RFTFWPQAFLGLTINWGALLGWTAVKGSIAPSIVLPLYLSGVCWTLVYDTIYAHQLHHHRFLFQL 317

  Fly   261 ------------DKLDDLQIGVKSTALRFGENTKVWLSGFTAAMLTGLSAAGWACDQTVPYYAAV 313
                        ||.||:::||||||||||:|||:||:||..|.:..|:.:|::.|....|||::
plant   318 LFHVSCKCIHFDDKEDDVKVGVKSTALRFGDNTKLWLTGFGTASIGFLALSGFSADLGWQYYASL 382

  Fly   314 GVVGAHLVQQIYSLNIDNPSDCAKKFISNHQVGLILFLGIVLG 356
            ......|..||.:.::.:.:||::||:||...|.|:|.|:|||
plant   383 AAASGQLGWQIGTADLSSGADCSRKFVSNKWFGAIIFSGVVLG 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq2NP_649789.1 PT_UbiA 73..358 CDD:294241 163/306 (53%)
PPT1NP_001190815.1 PLN02809 119..429 CDD:178405 163/307 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 298 1.000 Domainoid score I342
eggNOG 1 0.900 - - E1_COG0382
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69192
Inparanoid 1 1.050 338 1.000 Inparanoid score I650
OMA 1 1.010 - - QHG57870
OrthoDB 1 1.010 - - D1343847at2759
OrthoFinder 1 1.000 - - FOG0004404
OrthoInspector 1 1.000 - - oto3754
orthoMCL 1 0.900 - - OOG6_101249
Panther 1 1.100 - - LDO PTHR11048
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3123
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.930

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