DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq2 and Cox10

DIOPT Version :10

Sequence 1:NP_649789.1 Gene:Coq2 / 40988 FlyBaseID:FBgn0037574 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_609382.1 Gene:Cox10 / 34394 FlyBaseID:FBgn0032222 Length:391 Species:Drosophila melanogaster


Alignment Length:403 Identity:97/403 - (24%)
Similarity:161/403 - (39%) Gaps:82/403 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RQPARVLIGDWSTWDKSRLQDVCSRSSSTATEPVKQQTPLQELVSA-----AKPY-------AQL 83
            |.|..:::..:||......||  .:..:||: ||.|...:|.|..:     ..||       :|.
  Fly    15 RTPVDLVLIRYSTAATIASQD--DKGVTTAS-PVSQAGKVQHLPDSQITWMPSPYTMPGKTLSQY 76

  Fly    84 MRIDRPIGTYLLFWPCAWSIALSADAGCWPDLTMLGLFGTGALIMRGAGCTINDLWDKDIDAKVE 148
            .::.:...|.|:........|: |.|...|....:...|||  ::..|...||...:...|:::.
  Fly    77 KKLSKFRLTSLVVITTMGGYAM-APAAFDPTTFAMCTLGTG--LVSAAANAINQYHEVPFDSQMS 138

  Fly   149 RTRLRPLASGQISQFDAIVFLSAQLSLGLLVL-VQLNWQSILLGASSLGLVIT-YPLMKRVTY-- 209
            ||:.|.|.:||::...|:.|.:...:.||.:| ..:|..:..|||.:|.|..| |..|||::.  
  Fly   139 RTKNRVLVTGQMTPLHAVTFAAVSATAGLSMLYFGVNGLTAALGAGNLFLYTTIYTPMKRISIVN 203

  Fly   210 -WPQLVLGMAFNWGALLGW--CAT---QGSVNLAACL-----PLYLSGVCWTIVYDTIYAHQDKL 263
             |...::|..   ..|:||  ||.   .|::.||..|     | :.:.:.|.:..|...|....:
  Fly   204 TWVGSIVGAI---PPLMGWAGCAATLDAGAMILAGVLYAWQFP-HFNALSWNLRPDYSRAGYRMM 264

  Fly   264 DDLQIGV-KSTALRFGENTKVWLSGFTAAMLTGLSAAG--------WACDQTVPYYAAVGVVGAH 319
            .....|: :.||||:            :..:.||||..        |...:|:|       :.|:
  Fly   265 AVTNPGLCRRTALRY------------SVAIVGLSAMAPVLDVTNYWFALETLP-------LNAY 310

  Fly   320 LVQQIYSLNIDNPSDCAKKFISNHQVGL----ILFLGIVLGTLLK--------SDESKKQRQSSL 372
            .....|..:..:.|..::|......:.|    :|||     |..|        .:|:||:...|.
  Fly   311 FAYLAYKFHEKSDSGSSRKLFRFSLIHLPALMLLFL-----TNKKEWYFSKPAGEENKKESTYSA 370

  Fly   373 TTSTASSYVPALP 385
            ...:|||....||
  Fly   371 IKHSASSLGNVLP 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq2NP_649789.1 PT_UbiA 73..358 CDD:469727 74/324 (23%)
Cox10NP_609382.1 PT_UbiA_Cox10 78..344 CDD:260120 67/291 (23%)

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