DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq2 and ppt1

DIOPT Version :9

Sequence 1:NP_649789.1 Gene:Coq2 / 40988 FlyBaseID:FBgn0037574 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_593219.2 Gene:ppt1 / 2543235 PomBaseID:SPAC56F8.04c Length:360 Species:Schizosaccharomyces pombe


Alignment Length:359 Identity:152/359 - (42%)
Similarity:212/359 - (59%) Gaps:33/359 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 MLPR-QPARVLI--GDWST---WDKSRLQDVCSRSSSTATEPVKQQTPLQELVSAAKP------- 79
            :||: .|||..:  ..||.   :...:::.:..|::|:     ...||  .|:|.:|.       
pombe     5 LLPQPSPARYFLRTPSWSAVAIFQAVKIKPLQLRTNSS-----NSVTP--NLISPSKKSWKDLFS 62

  Fly    80 -----YAQLMRIDRPIGTYLLFWPCAWSIALSA---DAGCWPDLTMLGLFGTGALIMRGAGCTIN 136
                 ||::.|...|.|||||:.||.|||.::|   |:.......||.|||.|:.:||.|||.||
pombe    63 KRWQYYAEISRAGSPTGTYLLYSPCTWSILMAAYAYDSSLVNVTKMLALFGVGSFLMRSAGCVIN 127

  Fly   137 DLWDKDIDAKVERTRLRPLASGQISQFDAIVFLSAQLSLGLLVLVQLNWQSILLGASSLGLVITY 201
            ||||:::||||||::.||||||::|...||..||.||:..|.:|:|||..:|.||.:||..|..|
pombe   128 DLWDRELDAKVERSKSRPLASGKLSVRQAISLLSVQLTASLGILLQLNPYTIKLGVASLVPVCIY 192

  Fly   202 PLMKRVTYWPQLVLGMAFNWGALLGWCATQGS--VNLAACLPLYLSGVCWTIVYDTIYAHQDKLD 264
            |.|||:||:||:|||:.|.:||::||.|..|.  :|.:...|||||.:.|.::||||||||||.|
pombe   193 PAMKRITYYPQVVLGLTFGYGAVMGWPALAGEACMNWSVVAPLYLSTISWIVLYDTIYAHQDKRD 257

  Fly   265 DLQIGVKSTALRFGENTKVWLSGFTAAMLTGLSAAGWACDQTVPYYAAVGVVGA--HLVQQIYSL 327
            |::..:.|||||||:|||..|.|..|..:..|:.||....|. |.:..:||.||  .|...||.:
pombe   258 DVKANIYSTALRFGDNTKPVLCGLAALQIATLATAGIMNGQG-PVFYTLGVAGAAYRLSSMIYKV 321

  Fly   328 NIDNPSDCAKKFISNHQVGLILFLGIVLGTLLKS 361
            ::|:|.||.:.|..|...|.::...|.|..|.||
pombe   322 DLDDPKDCFRWFKRNSNTGYLVAAAIALDWLAKS 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq2NP_649789.1 PT_UbiA 73..358 CDD:294241 138/303 (46%)
ppt1NP_593219.2 ubiA_proteo 65..352 CDD:130539 135/287 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 225 1.000 Domainoid score I526
eggNOG 1 0.900 - - E1_COG0382
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69192
Inparanoid 1 1.050 259 1.000 Inparanoid score I752
OMA 1 1.010 - - QHG57870
OrthoFinder 1 1.000 - - FOG0004404
OrthoInspector 1 1.000 - - oto100507
orthoMCL 1 0.900 - - OOG6_101249
Panther 1 1.100 - - LDO PTHR11048
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R232
SonicParanoid 1 1.000 - - X3123
TreeFam 1 0.960 - -
1312.950

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