DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq2 and coq2

DIOPT Version :9

Sequence 1:NP_649789.1 Gene:Coq2 / 40988 FlyBaseID:FBgn0037574 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_002936501.2 Gene:coq2 / 100486844 XenbaseID:XB-GENE-967037 Length:387 Species:Xenopus tropicalis


Alignment Length:293 Identity:188/293 - (64%)
Similarity:236/293 - (80%) Gaps:0/293 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 KPYAQLMRIDRPIGTYLLFWPCAWSIALSADAGCWPDLTMLGLFGTGALIMRGAGCTINDLWDKD 142
            :||.:|||:|:||||:||:.||.|||:|:|:.|.:|||.||.||||||::||||||||||:||||
 Frog    95 QPYLKLMRLDKPIGTWLLYLPCTWSISLAAEPGSFPDLHMLALFGTGAVLMRGAGCTINDMWDKD 159

  Fly   143 IDAKVERTRLRPLASGQISQFDAIVFLSAQLSLGLLVLVQLNWQSILLGASSLGLVITYPLMKRV 207
            .|.||:||..||:|:|.||||.::|||..||||.|.||:.||:.||.|||:||.||::||||||:
 Frog   160 FDKKVQRTASRPIAAGDISQFQSLVFLGGQLSLALSVLLSLNYYSIALGAASLSLVVSYPLMKRI 224

  Fly   208 TYWPQLVLGMAFNWGALLGWCATQGSVNLAACLPLYLSGVCWTIVYDTIYAHQDKLDDLQIGVKS 272
            ||||||||||.||||.||||.|.:||.:.:.|||||:||:.||::||||||||||.||:.:||||
 Frog   225 TYWPQLVLGMTFNWGCLLGWSAVKGSCDWSVCLPLYVSGIMWTLIYDTIYAHQDKKDDVLVGVKS 289

  Fly   273 TALRFGENTKVWLSGFTAAMLTGLSAAGWACDQTVPYYAAVGVVGAHLVQQIYSLNIDNPSDCAK 337
            |||||.|.||.||||||.||:|||:..|.:||||.|||.||.::||.|..|||:|:|::..||.|
 Frog   290 TALRFNEQTKQWLSGFTVAMMTGLTVTGMSCDQTFPYYIAVALIGAQLTHQIYTLDINSAEDCWK 354

  Fly   338 KFISNHQVGLILFLGIVLGTLLKSDESKKQRQS 370
            ||.||..||::||:|||||.|.||.::..:..|
 Frog   355 KFSSNRNVGILLFIGIVLGNLWKSQDASTKESS 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq2NP_649789.1 PT_UbiA 73..358 CDD:294241 184/279 (66%)
coq2XP_002936501.2 PT_UbiA 90..376 CDD:412319 184/280 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 353 1.000 Domainoid score I998
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69192
Inparanoid 1 1.050 411 1.000 Inparanoid score I1815
OMA 1 1.010 - - QHG57870
OrthoDB 1 1.010 - - D1343847at2759
OrthoFinder 1 1.000 - - FOG0004404
OrthoInspector 1 1.000 - - oto102378
Panther 1 1.100 - - LDO PTHR11048
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R232
SonicParanoid 1 1.000 - - X3123
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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