DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7483 and UAP56a

DIOPT Version :10

Sequence 1:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_568244.2 Gene:UAP56a / 830986 AraportID:AT5G11170 Length:427 Species:Arabidopsis thaliana


Alignment Length:421 Identity:153/421 - (36%)
Similarity:228/421 - (54%) Gaps:32/421 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARKN-AQAEDLSNVEFETSEDVEVIPTFNAMN--------------------LKEELLRGIYAYG 45
            ||.| |..|:|.:.|   .||.:|..:.|.:|                    ||.||||.|...|
plant     4 ARDNEAYEEELLDYE---EEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65

  Fly    46 FEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQI 110
            ||.||.:|...|...:.|.|||.||:||.||||.|.:|.||.::.:..:...|.|..|||||.||
plant    66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQI 130

  Fly   111 QKVILALGDMM-NVQCHVCIGGTN--LGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKML 172
            ....:.....: :.:..|..||.|  :.:|:.|.:. .|||.||||||..:.:.:.|..:.::..
plant   131 CNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNEC-PHIVVGTPGRVLALAREKDLSLKNVRHF 194

  Fly   173 VLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRD-ELT 235
            :|||.|:||.. ..:..:.::::..|...||::.||||..||..:..|||.||:.|.|..: :||
plant   195 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT 259

  Fly   236 LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP 300
            |.|:.|.::.:...| |...|.||.|.|...|.|||..:..:...|.:.:.|.||....:|..|.
plant   260 LHGLVQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323

  Fly   301 QKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA 365
            |:||....|.|:.|..|:|:.||:..||||:::|::|||||:|::.:.|:||:||:||||.||:|
plant   324 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLA 388

  Fly   366 INFVKS-DDIRILRDIEQYYSTQIDEMPMNV 395
            |.||.| .|..:|..:::.:...|.|:|..:
plant   389 ITFVASASDSEVLNQVQERFEVDIKELPEQI 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7483NP_649788.2 DEAD-like_helicase_N 4..399 CDD:475120 151/419 (36%)
UAP56aNP_568244.2 DEADc_DDX39 45..252 CDD:350708 76/207 (37%)
SF2_C_DEAD 263..392 CDD:350174 52/129 (40%)

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