DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7483 and pit

DIOPT Version :9

Sequence 1:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001287459.1 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster


Alignment Length:416 Identity:123/416 - (29%)
Similarity:215/416 - (51%) Gaps:48/416 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTG 75
            |:.:::..|:|........|::  |..||.|...||.:.:.||.:|:||::||||::..||:|:|
  Fly   174 LAALDYRDSDDRSFASLKGAVS--EATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSG 236

  Fly    76 KTATFSISILQSLDTTLR-----ETQVLCLSPTRELAVQIQKVILALGDMMNVQCH------VCI 129
            ||..|.|..:: |...||     .|.|:.:||||||::|      ..|.:..:..|      :.:
  Fly   237 KTLAFLIPAVE-LINKLRFMPRNGTGVIIISPTRELSMQ------TFGVLKELMAHHHHTYGLVM 294

  Fly   130 GGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRV-LRTRAIKMLVLDEADEMLNKGFKEQIYDVY 193
            ||:|...:..||..|.:|:..||||:.|.::... ...:.::.|::||.|.:|..||:|::..:.
  Fly   295 GGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQII 359

  Fly   194 RYLPPATQVVLISATLPHEILEMTSK--FMTDPIRILV--KRDELTLEGIKQFFVAVEREEWKFD 254
            ..||...|.:|.|||....| |..||  ..::||.:.|  .:|..|::|::|.::....|:    
  Fly   360 NLLPKRRQTMLFSATQTARI-EALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEK---- 419

  Fly   255 TLCDLYDTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQS 316
            .|..|:..|...   :.::|.::...|.:..|.....:..|:|:||...|.:|.....:|...:|
  Fly   420 RLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAES 484

  Fly   317 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR-FGRKGVAINFVKSDDIRILRDI 380
            .:|:.|||.|||:|:.||..::.||.|::...||||:||:.| .|..|.|:..::.:::..||.:
  Fly   485 GILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYL 549

  Fly   381 EQYYSTQIDEMPMN--------VADL 398
                  :..::|:|        :||:
  Fly   550 ------KAAKVPLNEFEFSWQKIADI 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7483NP_649788.2 PTZ00424 4..399 CDD:185609 123/416 (30%)
pitNP_001287459.1 SrmB 186..677 CDD:223587 120/404 (30%)
DEADc 187..394 CDD:238167 71/216 (33%)
HELICc 408..537 CDD:238034 39/132 (30%)
DUF4217 569..627 CDD:290667 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451799
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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