DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7483 and pit

DIOPT Version :10

Sequence 1:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_524446.3 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster


Alignment Length:416 Identity:123/416 - (29%)
Similarity:215/416 - (51%) Gaps:48/416 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTG 75
            |:.:::..|:|........|::  |..||.|...||.:.:.||.:|:||::||||::..||:|:|
  Fly   174 LAALDYRDSDDRSFASLKGAVS--EATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSG 236

  Fly    76 KTATFSISILQSLDTTLR-----ETQVLCLSPTRELAVQIQKVILALGDMMNVQCH------VCI 129
            ||..|.|..:: |...||     .|.|:.:||||||::|      ..|.:..:..|      :.:
  Fly   237 KTLAFLIPAVE-LINKLRFMPRNGTGVIIISPTRELSMQ------TFGVLKELMAHHHHTYGLVM 294

  Fly   130 GGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRV-LRTRAIKMLVLDEADEMLNKGFKEQIYDVY 193
            ||:|...:..||..|.:|:..||||:.|.::... ...:.::.|::||.|.:|..||:|::..:.
  Fly   295 GGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQII 359

  Fly   194 RYLPPATQVVLISATLPHEILEMTSK--FMTDPIRILV--KRDELTLEGIKQFFVAVEREEWKFD 254
            ..||...|.:|.|||....| |..||  ..::||.:.|  .:|..|::|::|.::....|:    
  Fly   360 NLLPKRRQTMLFSATQTARI-EALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEK---- 419

  Fly   255 TLCDLYDTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQS 316
            .|..|:..|...   :.::|.::...|.:..|.....:..|:|:||...|.:|.....:|...:|
  Fly   420 RLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAES 484

  Fly   317 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR-FGRKGVAINFVKSDDIRILRDI 380
            .:|:.|||.|||:|:.||..::.||.|::...||||:||:.| .|..|.|:..::.:::..||.:
  Fly   485 GILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYL 549

  Fly   381 EQYYSTQIDEMPMN--------VADL 398
                  :..::|:|        :||:
  Fly   550 ------KAAKVPLNEFEFSWQKIADI 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7483NP_649788.2 DEAD-like_helicase_N 4..399 CDD:475120 123/416 (30%)
pitNP_524446.3 DEADc_DDX18 198..395 CDD:350700 69/204 (34%)
SF2_C_DEAD 408..537 CDD:350174 39/132 (30%)
DUF4217 570..627 CDD:464056 123/416 (30%)

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