DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7483 and abs

DIOPT Version :10

Sequence 1:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster


Alignment Length:396 Identity:122/396 - (30%)
Similarity:199/396 - (50%) Gaps:23/396 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTA 78
            ||.||..  ..|.:|..|...:.:|.|:.|.|.:.|:.||.:.:..::.|||:|..|.:|:|||.
  Fly   167 VEGETPS--PPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTL 229

  Fly    79 TFSISILQ-------SLDTTLRETQV-LCLSPTRELAVQIQKVI------LALGDMMNVQCHVCI 129
            .|.:.::.       ||.....|... |.:.|:||||.|..::|      |....|..::..:.:
  Fly   230 VFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAM 294

  Fly   130 GGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 194
            ||..:.|.:..:..|.|||..||||:.||:.:::|.....:.|.:||||.|::.||:|.:..::.
  Fly   295 GGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFS 359

  Fly   195 YLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL 259
            :.....|.:|.|||:|.:|.......:..|:.|.|.|.......:.|....|::|.    .:..|
  Fly   360 FFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEA----KVVYL 420

  Fly   260 YDTL--TITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITT 322
            .|.|  |....:||...|:.||.:.|.:........::||...|:||...:..:|.|:..||:.|
  Fly   421 LDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVAT 485

  Fly   323 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV-KSDDIRILRDIEQYYST 386
            ||.::|:|...|..|||||:|::.|.|:|||||:||...||:|...: |:.:..:|.|::.....
  Fly   486 DVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIE 550

  Fly   387 QIDEMP 392
            ...|:|
  Fly   551 GKQEVP 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7483NP_649788.2 DEAD-like_helicase_N 4..399 CDD:475120 122/396 (31%)
absNP_524220.1 DEADc_DDX41 188..393 CDD:350709 61/204 (30%)
SF2_C_DEAD 404..532 CDD:350174 46/131 (35%)

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