DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7483 and Hlc

DIOPT Version :9

Sequence 1:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001285517.1 Gene:Hlc / 33118 FlyBaseID:FBgn0001565 Length:560 Species:Drosophila melanogaster


Alignment Length:411 Identity:98/411 - (23%)
Similarity:193/411 - (46%) Gaps:77/411 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISILQ-----S 87
            |:.:.|.:.:|:.:...|:::|:.||..:|..:::|:||:.:|::|:|||||:::.::|     .
  Fly    11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKILNSK 75

  Fly    88 LDTTLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTP 152
            |:.:.:....:.|:||:||..|.:|||    :.:...|...:...::.:........:|.:|.:|
  Fly    76 LNASEQYVSAVVLAPTKELCRQSRKVI----EQLVESCGKVVRVADIADSSNDTVTQRHALSESP 136

  Fly   153 ----------------GRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 201
                            |.|.|:        :.::.||:||||.:...|:::....:.::|||..|
  Fly   137 DIVVATPANLLAYAEAGSVVDL--------KHVETLVVDEADLVFAYGYEKDFKRLIKHLPPIYQ 193

  Fly   202 VVLISATLPHEILEMTSKFMTDPIRI------LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 260
            .||:||||..:::.|....:.:|:.:      ||.:|:|:    .|..:|.|.     |....||
  Fly   194 AVLVSATLTDDVVRMKGLCLNNPVTLKLEEPELVPQDQLS----HQRILAEEN-----DKPAILY 249

  Fly   261 DTLTIT----QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLIT 321
            ..|.:.    :::||.|:..:...:...:.:.......::.::|...|...:.:|..|...::|.
  Fly   250 ALLKLRLIRGKSIIFVNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIA 314

  Fly   322 TDVW-------------------------ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGR 361
            :|..                         :||||.|.|:.|||:|.|.:...||||.||:.|...
  Fly   315 SDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNN 379

  Fly   362 KGVAINFVKSDDIRILRDIEQ 382
            ||..::||...:.::...:|:
  Fly   380 KGSVLSFVSMKESKVNDSVEK 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7483NP_649788.2 PTZ00424 4..399 CDD:185609 98/411 (24%)
HlcNP_001285517.1 P-loop_NTPase 11..220 CDD:304359 55/220 (25%)
DEXDc 24..231 CDD:214692 54/218 (25%)
HELICc 234..386 CDD:238034 36/156 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451785
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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