DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7483 and Ddx39b

DIOPT Version :10

Sequence 1:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_579834.2 Gene:Ddx39b / 114612 RGDID:70923 Length:428 Species:Rattus norvegicus


Alignment Length:370 Identity:143/370 - (38%)
Similarity:216/370 - (58%) Gaps:6/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTL 92
            |....||.||||.|...|||.||.:|...|...:.|.||:.||:||.||||.|.::.||.|:...
  Rat    47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111

  Fly    93 RETQVLCLSPTRELAVQIQKVILALGDMM-NVQCHVCIGGTNLGEDIRKLDYG-QHIVSGTPGRV 155
            .:..||.:..|||||.||.|........| ||:..|..||.::.:|...|... .|||.|||||:
  Rat   112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176

  Fly   156 FDMIKRRVLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSK 219
            ..:.:.:.|..:.||..:|||.|:||.: ..:..:.:::|..|...||::.||||..||..:..|
  Rat   177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRK 241

  Fly   220 FMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTE 283
            ||.||:.|.|..: :|||.|::|::|.::..| |...|.||.|.|...|.|||..:.::...|.:
  Rat   242 FMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQ 305

  Fly   284 KMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNREL 348
            .:.|.||...::|..|||:||....::|:..|.|:|:.|:::.||:|:::|::..|||:|.:.:.
  Rat   306 LLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 370

  Fly   349 YIHRIGRSGRFGRKGVAINFVKSD-DIRILRDIEQYYSTQIDEMP 392
            |:||:.|:||||.||:||.||..: |.:||.|::..:...|.|:|
  Rat   371 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7483NP_649788.2 DEAD-like_helicase_N 4..399 CDD:475120 143/370 (39%)
Ddx39bNP_579834.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
DEADc_DDX39 44..251 CDD:350708 81/203 (40%)
Q motif 45..73 13/25 (52%)
DECD box 196..199 2/2 (100%)
SF2_C_DEAD 262..391 CDD:350174 48/129 (37%)
Blue background indicates that the domain is not in the aligned region.

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