DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tex and NUP37

DIOPT Version :10

Sequence 1:NP_649784.1 Gene:tex / 40983 FlyBaseID:FBgn0037569 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_076962.2 Gene:NUP37 / 79023 HGNCID:29929 Length:326 Species:Homo sapiens


Alignment Length:130 Identity:29/130 - (22%)
Similarity:57/130 - (43%) Gaps:20/130 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 HMSKVHSVCWNADGRY--------LASGSFDKTVVVYSLE-RDRFLKGNTYR---GHTASVDQLC 79
            |..:|..:.|:.:.|.        ..:.:.|..:.:::.: :|:    |.|:   |||..::.|.
Human    71 HGVRVDGIAWSPETRLDSLPPVIKFCTSAADMKIRLFTSDLQDK----NEYKVLEGHTDFINGLV 131

  Fly    80 WHRTNPDQFATASGDKTVRIWDIR-VGKCVSVTNTKGENINIAWSPDGK-TIAVGNKEDLITFID 142
            :......:.|:.|.|.|.|||::. |.....|.::.|  :::.|.|:.. .:.|..|...|.|.|
Human   132 FDPKEGQEIASVSDDHTCRIWNLEGVQTAHFVLHSPG--MSVCWHPEETFKLMVAEKNGTIRFYD 194

  Fly   143  142
            Human   195  194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
texNP_649784.1 WD40 <15..260 CDD:441893 29/130 (22%)
WD40 repeat 32..70 CDD:293791 6/49 (12%)
WD40 repeat 75..112 CDD:293791 10/37 (27%)
WD40 repeat 118..183 CDD:293791 7/26 (27%)
WD40 repeat 200..234 CDD:293791
NUP37NP_076962.2 WD 1 6..54
WD40 <16..216 CDD:441893 29/130 (22%)
WD40 repeat 22..70 CDD:293791
WD 2 61..109 5/37 (14%)
WD40 repeat 76..122 CDD:293791 6/49 (12%)
WD 3 115..154 13/38 (34%)
WD40 repeat 127..163 CDD:293791 9/35 (26%)
WD 4 159..195 9/38 (24%)
WD40 repeat 170..205 CDD:293791 7/25 (28%)
WD 5 199..237
WD40 repeat 211..248 CDD:293791
WD 6 242..282
WD 7 287..324
WD40 repeat 291..322 CDD:293791
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.