Protein Alignment tex and Nup37

DIOPT Version :10

• Sequence 1: NP_649784.1
• Gene: tex / 40983
• FlyBaseID: FBgn0037569
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001100245.1
• Gene: Nup37 / 299706
• RGDID: 1307774
• Length: 326
• Species: Rattus norvegicus
• Alignment Length: 263
• Identity: 53/263 - (20%)
• Similarity: 93/263 - (35%)
• Gaps: 80/263 - (30%)

  Fly    27 HMSKVHSVCWNADGRY--------LASGSFDKTVVVYSLE-RDRFLKGNTYR---GHTASVDQLC 79
            |..:|..:.|:.:.:.        ..:.:.|..:.:::.: :|:    |.|:   ||:..::.|.
  Rat    71 HGVRVDGIAWSPETKLDSLPPVIKFCTSAADMKIRLFTSDLQDK----NEYKVLEGHSDFINDLV 131

  Fly    80 WHRTNPDQFATASGDKTVRIWDIRVGKCVSVTNTKGENINIAWSPDGK-TIAVGNKEDLITFIDT 143
            :|.....:.|:.|.|.|.|||.:. ||..:........:::.|.|:.. .:.|..|...|.|.|.
  Rat   132 FHPREGQEIASVSDDHTCRIWSLE-GKQTAHFLLHSPGMSVCWHPEETFKLMVAEKNGTIRFYDL 195

  Fly   144 RTNKIRVEEPFSFEVNEISWNNTNDLFFLTNGLGCMHILSYPSLEHQMTLKAHPANCICIEFGPT 208
            ...:.                                |||..| |....:.||    .|::
  Rat   196 MAQQA--------------------------------ILSLQS-EQTPLMSAH----WCLK---- 219

  Fly   209 GKYFATGS-ADAQVSLWDANELACLRMISRLEWPVRT----ISFSHDERMIALASEDLIIDIAFT 268
             ..|..|: |.....:||         |:|..:|..|    :..:|..|..|: ||:|     |.
  Rat   220 -NTFKVGAVAGNDWIIWD---------ITRSSYPQETRPVHMDRAHSFRWSAI-SENL-----FA 268

  Fly   269 ETG 271
            .||
  Rat   269 TTG 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tex	NP_649784.1	WD40	<15..260	CDD:441893	48/250 (19%)
		WD40 repeat	32..70	CDD:293791	5/49 (10%)
		WD40 repeat	75..112	CDD:293791	11/36 (31%)
		WD40 repeat	118..183	CDD:293791	8/65 (12%)
		WD40 repeat	200..234	CDD:293791	6/34 (18%)
Nup37	NP_001100245.1	WD40 repeat	22..70	CDD:293791
		WD40	<64..260	CDD:475233	46/244 (19%)
		WD40 repeat	76..122	CDD:293791	5/49 (10%)
		WD40 repeat	127..163	CDD:293791	11/36 (31%)
		WD40 repeat	170..205	CDD:293791	10/66 (15%)
		WD40 repeat	211..248	CDD:293791	12/54 (22%)
		WD40 repeat	291..322	CDD:293791