DRSC/TRiP Functional Genomics Resources

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Protein Alignment tex and Nup37

DIOPT Version :10

Sequence 1:NP_649784.1 Gene:tex / 40983 FlyBaseID:FBgn0037569 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_320638.4 Gene:Nup37 / 1280772 VectorBaseID:AGAMI1_004068 Length:320 Species:Anopheles gambiae


Alignment Length:199 Identity:44/199 - (22%)
Similarity:78/199 - (39%) Gaps:47/199 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KSYLRSHSKIREQRSHMSKVHSVCWNADGRYLASGSFDKTVVVYSLERDRFLKGNTYRGHTASVD 76
            :|.|.....::....|.|.|:.|.|:.||.:|||.|.|.:.|::..:.| :.:|.::...:| |.
Mosquito   104 QSDLDQSDTVQLLEGHSSYVNHVSWDPDGEFLASCSDDNSCVLWKCKED-YSQGPSFFFGSA-VQ 166

  Fly    77 QLCWHRTNPDQFATASGDKTVRIWDIRVGKCVSVTNTKGENINIAWSPDGKTIAVGNKEDLITFI 141
            ...||   |::    ||...:      ..||.::...|                |..|..::: :
Mosquito   167 SAKWH---PEE----SGHLLI------AEKCGAIHLYK----------------VHMKTSMLS-V 201

  Fly   142 DTRTNKIRVEEPFSFEVNEISWNNTNDLFFLTNGLGCMHILSYPSLEHQMTLKAHPANCIC---I 203
            :|.||      |.|:    ..|:..|..:......||  |.|:........::..|.:..|   :
Mosquito   202 ETDTN------PLSY----ADWSLANAAYVAAMARGC--IFSWDLKNASWPIENKPMHDECGHIV 254

  Fly   204 EFGP 207
            :|.|
Mosquito   255 KFSP 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
texNP_649784.1 WD40 <15..260 CDD:441893 43/196 (22%)
WD40 repeat 32..70 CDD:293791 12/37 (32%)
WD40 repeat 75..112 CDD:293791 8/36 (22%)
WD40 repeat 118..183 CDD:293791 12/64 (19%)
WD40 repeat 200..234 CDD:293791 3/11 (27%)
Nup37XP_320638.4 None

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