DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt1 and sugt1

DIOPT Version :10

Sequence 1:NP_649783.2 Gene:Sgt1 / 40982 FlyBaseID:FBgn0265101 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001016156.1 Gene:sugt1 / 548910 XenbaseID:XB-GENE-919559 Length:330 Species:Xenopus tropicalis


Alignment Length:194 Identity:87/194 - (44%)
Similarity:124/194 - (63%) Gaps:23/194 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RHDWYQSETKVVITVLLKNAVDKNYAVEITQKR--VHM---TADGYELDLKLLHPIVVERSSYKA 63
            ||||||:|:.::|||::||....|..:..:::.  |:|   :.:.|.|:|.|||.||.::|.:|.
 Frog   139 RHDWYQTESHIIITVMIKNVQKNNVHIRFSERELTVNMSLPSGENYSLNLHLLHAIVPDQSIFKV 203

  Fly    64 FSTKVEITLAKETGIRWENLE------------EAIVAAPVKPK-AKNWDQLV---SEEEKIDEK 112
            .||||||.|.|...:|||.||            |::...|.... .||||:||   .||||.::.
 Frog   204 LSTKVEIKLKKTEAMRWETLEGKADSQVKHFTQESMHKYPSSSHYTKNWDKLVGQIKEEEKNEKL 268

  Fly   113 EAKGEAALTNLFKKIYSSSSPEVQKAMNKSFSESGGTVLSTNWNEVGKERVTVKPPNGTEFREW 176
            |  |:|||..||::|||..:.||::||||||.|||||||||||.:|||::|.|.||:..|::::
 Frog   269 E--GDAALNQLFQQIYSDGNDEVKRAMNKSFMESGGTVLSTNWTDVGKKKVDVNPPDDMEWKQY 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sgt1NP_649783.2 PLN03088 <4..177 CDD:215568 87/194 (45%)
sugt1NP_001016156.1 PLN03088 15..330 CDD:215568 87/192 (45%)
TPR repeat 38..68 CDD:276809
TPR repeat 73..98 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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