DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgt1 and SUGT1

DIOPT Version :10

Sequence 1:NP_649783.2 Gene:Sgt1 / 40982 FlyBaseID:FBgn0265101 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001124384.1 Gene:SUGT1 / 10910 HGNCID:16987 Length:365 Species:Homo sapiens


Alignment Length:197 Identity:90/197 - (45%)
Similarity:129/197 - (65%) Gaps:25/197 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VRHDWYQSETKVVITVLLKNAVDKNYAVEITQKRVHM-----TADGYELDLKLLHPIVVERSSYK 62
            :::||||:|::||||:::||....:..||.::|.:..     :.:.|.|.|:|||||:.|:|::|
Human   172 IKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFK 236

  Fly    63 AFSTKVEITLAKETGIRWENLE-EAIVAAP------VK-------PKAKNWDQLVSE--EEKIDE 111
            ..|||:||.|.|...:|||.|| :..|..|      ||       |..:|||:||.|  ||:.:|
Human   237 VLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVGEIKEEEKNE 301

  Fly   112 KEAKGEAALTNLFKKIYSSSSPEVQKAMNKSFSESGGTVLSTNWNEVGKERVTVKPPNGTEFREW 176
            | .:|:|||..||::|||..|.||::||||||.|||||||||||::|||.:|.:.||:.   .||
Human   302 K-LEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDD---MEW 362

  Fly   177 EK 178
            :|
Human   363 KK 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sgt1NP_649783.2 PLN03088 <4..177 CDD:215568 88/193 (46%)
SUGT1NP_001124384.1 TPR 1 11..44
PLN03088 21..365 CDD:215568 90/197 (46%)
TPR repeat 44..74 CDD:276809
TPR 2 45..78
TPR 3 79..112
TPR repeat 79..107 CDD:276809
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.