DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL1 and RpL10Ab

DIOPT Version :9

Sequence 1:NP_524275.1 Gene:mRpL1 / 40980 FlyBaseID:FBgn0037566 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_648514.1 Gene:RpL10Ab / 39338 FlyBaseID:FBgn0036213 Length:217 Species:Drosophila melanogaster


Alignment Length:188 Identity:45/188 - (23%)
Similarity:73/188 - (38%) Gaps:40/188 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 LNLDIEL-NMQAEKITRFVDNFQRMAMIPHKFDHGEERKIIVF--------TKGNNEVLEAREAG 177
            :.|.|.| |...:|..|| ....::..||.     .:.|:.:.        .|.||......||.
  Fly    32 VELQIGLKNYDPQKDKRF-SGTVKLKHIPR-----PKMKVCILGDQQHCDEAKANNVDFMDAEAL 90

  Fly   178 ASLVGGVELIKDITSGELLLSDYQYVIAHPNILAELVAL--RGLMKR-KFPNPKS--ETLGTNLA 237
            ..|....:|:|.      |...|...:|..:::.::..|  .||.|. |||...|  |::...:.
  Fly    91 KKLNKNKKLVKK------LAKSYDAFLASESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIE 149

  Fly   238 EM--IVKF--------SSGISYSAAK-DEYQQNFGLITASVGTLDMDVQKLEENIKFL 284
            |:  .:||        |..:.:...| ||..||..|   |:..|...::|..:|::.|
  Fly   150 EVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNL---SINFLVSLLKKNWQNVRSL 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL1NP_524275.1 rplA_mito 97..246 CDD:273480 34/147 (23%)
RpL10AbNP_648514.1 Ribosomal_L1 3..217 CDD:412308 45/188 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0081
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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